BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018H02SP1|AL427387
(679 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1223 585 e-167
3x_Contig1388 557 e-159
>3x_Contig1223
Length = 4555
Score = 585 bits (291), Expect = e-167
Identities = 310/323 (95%)
Strand = Plus / Minus
Query: 1 gatcgatgagcaactcttgggttaaactcttaacgtttggggtacttaccattgtcgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gatcgatgagcaactcttgggttaaactcttaacgtttggggtacttaccattgtcgttc 285
Query: 61 tcaccttaatcttttgttcactttatttcagataccaactktcataacactaacacaaac 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 284 tcaccttaatcttttgttcactttatttcagataccaactgtcataacactaacacaaac 225
Query: 121 gggcagcaagagtccgcaactcatctcaagaacggtgctcctatatatataccacgcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gggcagcaagagtccgcaactcatctcaagaacggtgctcctatatatataccacgcacc 165
Query: 181 taatcatggataakactcattcttggactcatactcatactcataattttactcatcctt 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 taatcatggataagactcattcttggactcatactcatactcataattttactcatcctt 105
Query: 241 ktkttaaaattttttttktcttctcatctcttkaaktcttcacacttctcatttcckata 300
| |||||| | | ||| |||||||||||||| || |||||||||||||||||||| |||
Sbjct: 104 gtgttaaaagtgtgtttgtcttctcatctcttgaagtcttcacacttctcatttccgata 45
Query: 301 cataactaackckcttttacaac 323
|||||||||| | ||||||||||
Sbjct: 44 cataactaacgcgcttttacaac 22
>3x_Contig1388
Length = 8256
Score = 557 bits (277), Expect = e-159
Identities = 291/295 (98%), Gaps = 1/295 (0%)
Strand = Plus / Plus
Query: 386 aagccacactacccttttt-cccacacttataatatataccttaacttgcatatccactt 444
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 aagccacactacccttttttcccacacttataatatataccttaacttgcatatccactt 69
Query: 445 cttaccgacttgaccgactgctaataccgtggaactttcatattcgaaagtwgcatctaa 504
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 70 cttaccgacttgaccgactgctaataccgtggaactttcatattcgaaagtagcatctaa 129
Query: 505 gttaattatgtagcagttcaaccactttgctggtggcccaagttacattgtgtcaggtaa 564
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gtaaattatgtagcagtccaaccactttgctggtggcccaagttacattgtgtcaggtaa 189
Query: 565 tggaaaaggcactacggacatgccttggcaggcttctttctgccatctcatctcatcgct 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tggaaaaggcactacggacatgccttggcaggcttctttctgccatctcatctcatcgct 249
Query: 625 tctagcaactgcaacaaaaatttttcacttcgtctcgaaagcaattccggaattg 679
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tctagcaactgcaacaaaaatttttcacttcgtctcgaaagcaattccggaattg 304
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4699
Number of Sequences: 1807
Number of extensions: 4699
Number of successful extensions: 365
Number of sequences better than 1.0e-20: 2
length of query: 679
length of database: 10,358,551
effective HSP length: 16
effective length of query: 663
effective length of database: 10,329,639
effective search space: 6848550657
effective search space used: 6848550657
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)